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Erratum to: A quantitative assessment of the Hadoop framework for analyzing massively parallel DNA sequencing data

GigaScience volume 4, Article number: 61 (2015) Cite this article

The Original Article was published on 04 June 2015

Erratum

The original version of this article [1] unfortunately contained a publisher error in Fig. 4. The figure was incorrectly captured as a duplicate of Fig. 5. The correct Fig. 4 has been published in this Erratum. See Fig. 1.

Fig. 1
figure 1

The ratio of the F Hadoop /F HPC as a function of the reciprocal dataset size in Gb. The pipelines were run on the Hadoop I and II clusters, as well as a 16 core HPC node. The analytical curve f(x) = (a1x + b1)/(a2x + b2) was used to fit the data for the stretches of linear scaling of calculation time on the HPC platform. The outliers are marked with crossed symbols

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Reference

  1. Siretskiy A, Sundqvist T, Voznesenskiy M, Spjuth O. A quantitative assessment of the Hadoop framework for analyzing massively parallel DNA sequencing data. GigaScience. 2015;4:26.

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Authors and Affiliations

  1. Department of Information Technology, Uppsala University, P.O. Box 337, Uppsala, SE-75105, Sweden

    Alexey Siretskiy & Tore Sundqvist

  2. Department of Physical Chemistry, Institute of Chemistry, St-Petersburg State University, Saint-Petersburg, Russia

    Mikhail Voznesenskiy

  3. Department of Pharmaceutical Biosciences and Science for Life Laboratory, Uppsala University, P.O. Box 541, Uppsala, SE-75124, Sweden

    Ola Spjuth

Authors
  1. Alexey Siretskiy
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  2. Tore Sundqvist
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  3. Mikhail Voznesenskiy
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  4. Ola Spjuth
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Corresponding author

Correspondence to Alexey Siretskiy.

Additional information

The online version of the original article can be found under doi:10.1186/s13742-015-0058-5.

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Siretskiy, A., Sundqvist, T., Voznesenskiy, M. et al. Erratum to: A quantitative assessment of the Hadoop framework for analyzing massively parallel DNA sequencing data. GigaSci 4, 61 (2015). https://doi.org/10.1186/s13742-015-0100-7

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  • DOI: https://doi.org/10.1186/s13742-015-0100-7

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