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Table 1 Assembly and annotation of the ginkgo genome

From: Draft genome of the living fossil Ginkgo biloba

Category Number N50 (bp) Size (bp) Percentage of the assembly (%)
Contigs 6,990,752 48,207 10,115,209,138 --
Scaffolds 6,459,773 1,358,237 10,608,657,252 100.00
Repetitive sequence -- -- 8,124,064,469 76.58
Transposable elements LTR -- -- 6,434,519,114 60.65
DNA -- -- 354,935,994 3.34
LINE -- -- 460,463,526 4.34
SINE -- -- 261,728 0.00
Unknown -- -- 2,694,184,164 25.39
Annotated genes 41,840 -- 26,829/279/7884a 10.58
  1. aAverage mRNA length, exon length and intron length, respectively