Fig. 6
From: Scalable linkage-disequilibrium-based selective sweep detection: a performance guide
Example of the tiled LD data for an arbitrary iteration of the generic algorithm along with the corresponding per-region M matrices and the ω locations that can be calculated. Here, the number of SNP groups is T=6, the pairwise combination of which leads to the tiled matrix M that comprises 16 tiles (missing tiles correspond to distant SNPs, as determined by the −maxwin user-defined argument, and therefore are not computed). The corresponding number of ω locations that can be calculated in this iteration is k=4, i.e., L i to Li+k−1