From: Single-molecule optical genome mapping of a human HapMap and a colorectal cancer cell line
Enzyme | Usable DNA fragments (%) | Average fragment size (kb) | Maximum fragment size (kb) | #Fragments >100 kb | ||
---|---|---|---|---|---|---|
5–20 kb | 6–15 kb | 6–12 kb | ||||
AflII | 13.3 | 5.48 | 5.43 | 4.47 | 143.96 | 4 |
BamHI | 99.22 | 92.95 | 92.9 | 7.92 | 153.92 | 21 |
Kpn I | 99.95 | 99.88 | 99.51 | 9.98 | 171.76 | 65 |
NcoI | 0.08 | 0.03 | 0.03 | 3.81 | 164.18 | 2 |
NheI | 99.86 | 98.97 | 90.75 | 10.23 | 204.75 | 88 |
SpeI | 99.28 | 96.71 | 94.55 | 7.27 | 311.48 | 101 |
BglII | 2.33 | 0.81 | 0.8 | 3.71 | 109.69 | 1 |
EcoRI | 2.21 | 0.79 | 0.79 | 3.67 | 86.14 | 0 |
MluI | 0.34 | 0.01 | 0.01 | 135.32 | 2276.59 | 8295 |
NdeI | 5.9 | 1.78 | 1.78 | 3.19 | 105.86 | 1 |
PvuII | 0.03 | 0.02 | 0.02 | 2.66 | 173.76 | 6 |
XbaI | 2.75 | 1.15 | 1.15 | 3.58 | 146.27 | 2 |
XhoI | 17.02 | 6.37 | 2.21 | 23.78 | 430.88 | 3269 |