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Table 2 Time and memory consumption examples

From: Colib’read on galaxy: a tools suite dedicated to biological information extraction from raw NGS reads

Tool Sample type Number of reads Computation time Max. RAM use
KISSPLICE H. sapiens tissues RNA-seq 71 million 3 h 8 GB
DISCOSNP S. cerevisiae WGS 1.4 billion 34 h 6 GB
MAPSEMBLER2 S. cerevisiae WGS 430 million 24 h 1 GB
TAKEABREAK S. cerevisiae WGS 430 million 2 h 4 GB
COMMET Soil and seawater metagenomes 71 million 14 h 7 GB
LORDEC E. coli WGS 11 million and 0.08 million 3.3 h 0.66 GB
LORDEC S. cerevisiae WGS 2.25 million and 0.26 million 25 h 0.74 GB