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KISSPLICE
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One or more RNA-seq read set(s)
|
SNPs, small indels, alternative splicing events
|
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DISCOSNP
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One or more raw genomic read set(s)
|
SNP sequences with their coverages
|
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TAKEABREAK
|
One or more raw genomic read set(s)
|
Inversion breakpoints
|
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MAPSEMBLER2
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Pieces of known sequences, and associated raw read sets
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Validation and visualization of genome structure near a locus of interest
|
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COMMET
|
Several raw metagenomic complex read sets
|
Global comparison of input sets at the read level
|
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LORDEC
|
Illumina and PacBio read sets
|
Corrected PacBio read set
|
