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Fig. 5 | GigaScience

Fig. 5

From: Full-length single-cell RNA-seq applied to a viral human cancer: applications to HPV expression and splicing analysis in HeLa S3 cells

Fig. 5

The landscape of the HPV-18/cellular fusion and diversity of HPV-host splicing and expression in HeLa S3 cells. a The overview of the HPV-18 cellular fusion based on HeLa cell transcriptome. Blue lines denote fusion events. b The read coverage of HPV-18 genome in single cells and the bulk RNA. Colored vertical lines denote nucleotides of SNPs detected in the transcriptome. Light green, A; red, T; orange, G; blue, C. c The read coverage of the host region on chromosome 8 in single cells and the bulk RNA. d The schematic diagram of the inferred HPV integration structure (upper) and splicing forms (lower). RPM stands for reads per million

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