Table 6 Bowtie2 alignment of single-cell sequencing reads
From: Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads
| Â | k | Aligned | Rate | Base match rate | Specificity |
|---|---|---|---|---|---|
Original | - | 27,002,682 | 92.716 | 98.863 | - |
SPAdes | - | 27,104,190 | 93.065 | 99.675 | 41.482 |
SEECER | 27 | 26,937,652 | 92.493 | 99.507 | 99.553 |
Rcorrector | 19 | 27,227,855 | 93.489 | 99.711 | 99.998 |