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Table 6 Characteristics of predicted protein-coding genes in the Pogona vitticeps assembly and comparison with Anolis carolensis, Gallus gallus and Homo sapiens

From: High-coverage sequencing and annotated assembly of the genome of the Australian dragon lizard Pogona vitticeps

Gene set Total Intact ORF Single exon gene Gene length (bp) mRNA length (bp) Exons per gene Exon length (bp) Intron length (bp)
Homolog Anolis carolinensis 16,009 2,583 1,668 23,021 1,524 8.57 178 2,839
Gallus gallus 12,727 2,068 1,509 27,608 1,558 9.06 172 3,232
Homo sapiens 13,544 2,456 1,250 32,551 1,699 9.75 174 3,528
Combined 18,033 3,263 2,180 26,631 1,577 8.93 177 3,160
De novo (Augustus) 32,110 32,110 6,767 14,109 1,125 6.07 185 2,561
Transcriptome 22,986 14,555 2,951 12,511 1,214 6.99 174 1,885
Merged 19,406 12,172 1,999 26,215 1,642 9.24 178 2,984
Other species Anolis carolinensis 17,805 4,280 1,372 23,469 1,526 9.55 160 2,566
Gallus gallus 16,736 7,777 1,684 21,314 1,438 9.35 154 2,379
Homo sapiens 21,849 20,905 2,602 46,301 1,635 9.44 173 5,293
  1. Except for the columns headed Total, Intact ORF and Single exon gene, the values presented are means.
  2. Abbreviation: ORF open reading frame