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Table 1 Summary of sequencing data derived from paired-end sequencing of 13 insert libraries using an Illumina HiSeq 2000 platform

From: High-coverage sequencing and annotated assembly of the genome of the Australian dragon lizard Pogona vitticeps

    Raw data Filtered data
Insert size (bp) Accession numbers Nunber of libraries Read length (bp) Raw data (Gbp) Average read depth (X) Physical coverage (X) Read length (bp) Filtered data (Gbp) Average read depth (X) Physical coverage (X)
250 ERR409943 1 150 55.17 31.17 25.97 125 42.49 24.01 24.00
ERR409944
500 ERR409945 1 150 34.32 19.39 32.32 125 23.66 13.37 26.72
ERR409946
800 ERR409947 1 150 46.28 26.15 69.72 125 32.2 18.19 60.63
2,000 ERR440173 2 49 38.39 21.69 442.64 49 18.19 10.28 209.73
ERR409948
5,000 ERR409949 1 49 17.48 9.88 503.95 49 6.56 3.71 188.99
6,000 ERR409950 1 49 17.43 9.85 603.01 49 6.01 3.4 208.00
10,000 ERR409951 2 49 34.94 19.74 2,014.60 49 7.89 4.46 455.00
ERR409952
20,000 ERR409953 2 49 38.53 21.77 4,443.48 49 6.63 3.75 764.38
ERR409954
40,000 ERR409955 2 49 34.4 19.44 7,932.30 49 2.75 1.55 633.29
ERR409956
   13   316.94 179.06 16,067.99   146.38 82.7 2,570.74
  1. Read depth was calculated on the basis of a genome size of 1.77 Gbp. Average read depth, number of times on average a particular base is included in a read. Physical coverage, the number of times on average a particular base is spanned by a paired read