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Table 1 Summary of sequencing data derived from paired-end sequencing of 13 insert libraries using an Illumina HiSeq 2000 platform

From: High-coverage sequencing and annotated assembly of the genome of the Australian dragon lizard Pogona vitticeps

   

Raw data

Filtered data

Insert size (bp)

Accession numbers

Nunber of libraries

Read length (bp)

Raw data (Gbp)

Average read depth (X)

Physical coverage (X)

Read length (bp)

Filtered data (Gbp)

Average read depth (X)

Physical coverage (X)

250

ERR409943

1

150

55.17

31.17

25.97

125

42.49

24.01

24.00

ERR409944

500

ERR409945

1

150

34.32

19.39

32.32

125

23.66

13.37

26.72

ERR409946

800

ERR409947

1

150

46.28

26.15

69.72

125

32.2

18.19

60.63

2,000

ERR440173

2

49

38.39

21.69

442.64

49

18.19

10.28

209.73

ERR409948

5,000

ERR409949

1

49

17.48

9.88

503.95

49

6.56

3.71

188.99

6,000

ERR409950

1

49

17.43

9.85

603.01

49

6.01

3.4

208.00

10,000

ERR409951

2

49

34.94

19.74

2,014.60

49

7.89

4.46

455.00

ERR409952

20,000

ERR409953

2

49

38.53

21.77

4,443.48

49

6.63

3.75

764.38

ERR409954

40,000

ERR409955

2

49

34.4

19.44

7,932.30

49

2.75

1.55

633.29

ERR409956

  

13

 

316.94

179.06

16,067.99

 

146.38

82.7

2,570.74

  1. Read depth was calculated on the basis of a genome size of 1.77 Gbp. Average read depth, number of times on average a particular base is included in a read. Physical coverage, the number of times on average a particular base is spanned by a paired read