Skip to main content

Table 1 Bacterial genera most predictive of dysbiosis

From: Metabolome of human gut microbiome is predictive of host dysbiosis

Phylum

Class

Order

Family

Genus

Bacteroidetes

Bacteroidia

Bacteroidales

Porphyromonadaceae

Parabacteroides

Firmicutes

Bacilli

Gemellales

Gemellaceae

Gemella

Lactobacillales

Carnobacteriaceae

Granulicatella

Enterococcaceae

Enterococcus

Streptococcaceae

Lactococcus

Clostridia

Clostridiales

Clostridiaceae

Clostridium

Lachnospiraceae

Coprococcus

Epulopiscium

Lachnobacterium

Roseburia

Veillonellaceae

Veillonella

Fusobacteria

Fusobacteria

Fusobacteriales

Fusobacteriaceae

Fusobacterium

Proteobacteria

Epsilonproteobacteria

Campylobacterales

Campylobacteraceae

Campylobacter

Gammaproteobacteriaa

Enterobacterialesa

Enterobacteriaceaea

Enterobacter

Erwinia

Escherichia

Klebsiella

Morganella

Pantoea

Plesiomonas

Serratia

Tatumella

Trabulsiella

Pasteurellales

Pasteurellaceae

Haemophilus

  1. Taxonomies (class, order, or family) that are significantly enriched (p-value <0.05) in the set of genera highly predictive of dysbiosis, relative to all genera found to be present in microbiomes, are identified with ‘a’. Genera that are more abundant in dysbiotic microbiomes are highlighted with in bold text