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Table 3 Average Fmax for individual and ensemble methods

From: The PFP and ESG protein function prediction methods in 2014: effect of database updates and ensemble approaches

Method

Average Fmax

PFP-Updated

0.7447

PFP-OLD

0.5852

ESG-Updated

0.8401

ESG-OLD

0.7655

FFPred

0.3248

PFAM

0.5583

HHblits

0.4662

PSI-BLAST

0.5991

CONS

0.8085

FPM_MaxLen

0.7937

FPM_MaxScoreLen

0.4628

  1. All true and predicted annotations have been propagated to the root of the ontology. All three GO categories were used in the evaluation