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Table 1 Database update

From: The PFP and ESG protein function prediction methods in 2014: effect of database updates and ensemble approaches

 

2008 version

2013 version

Sequence database (Swiss-Prot-SeqDB)

  

Number of sequences

211,104

514,673

PFPDB (Annotation database for PFP)

  

Number of unique GO terms

18,327

35,029

External resources for PFPDB

HAMAP, InterPro, Swiss-Prot-keywords, PFAM, PRINTS, ProDom, PROSITE, SMART, TIGRFam

HAMAP, InterPro, PFAM, PRINTS, ProDom, PROSITE, SMART, TIGRFam, PIRSF, Reactome

Annotation database for ESG

  

Number of GO terms

13,420

23,896

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