Table 1 The number of proteins and the number of annotations in the train and test sets with respect to the three setups for yeast
From: A close look at protein function prediction evaluation protocols
| Â | Â | Training set | Â | Test set | |
|---|---|---|---|---|---|
| Â | Setup | Proteins | Annots. | Proteins | Annots. |
F | CV | 1532 | 2185 | 383 | 546 |
| Â | NA | 1367 | 1706 | 208 | 285 |
| Â | NP | 1367 | 1706 | 521 | 677 |
P | CV | 2752 | 5789 | 688 | 1447 |
| Â | NA | 2834 | 5161 | 633 | 990 |
| Â | NP | 2834 | 5161 | 604 | 1046 |
C | CV | 3731 | 7053 | 932 | 1763 |
| Â | NA | 4189 | 6968 | 813 | 1162 |
| Â | NP | 4189 | 6968 | 476 | 681 |