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Table 1 The number of proteins and the number of annotations in the train and test sets with respect to the three setups for yeast

From: A close look at protein function prediction evaluation protocols

   Training set   Test set
  Setup Proteins Annots. Proteins Annots.
F CV 1532 2185 383 546
  NA 1367 1706 208 285
  NP 1367 1706 521 677
P CV 2752 5789 688 1447
  NA 2834 5161 633 990
  NP 2834 5161 604 1046
C CV 3731 7053 932 1763
  NA 4189 6968 813 1162
  NP 4189 6968 476 681
  1. F, P and C represent molecular function, biological process and cellular component, respectively. For the CV setup, numbers represent average values computed across the training and test folds (5-fold CV)