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Figure 1 | GigaScience

Figure 1

From: Improving the ostrich genome assembly using optical mapping data

Figure 1

Relationships between OM super-scaffolds and the Illumina assembly scaffolds. The upper part of the figure shows the super-scaffolds generated by OM, and the lower shows the ordered Illumina scaffolds by aligning against the chicken Z chromosome. Because we made use of the FISH markers (red triangles) to resolve the artificial rearrangements introduced by alignment with the chicken genome, the scaffold order of the lower part was not the original order from the whole genome alignment. The red and blue underlines represent the PAR and W degenerated region, respectively.

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