Table 1 Raw statistics for bacterial and viral sequencing runs on the MinION™
BLASR | LAST | ||||||||
|---|---|---|---|---|---|---|---|---|---|
Dataset | Number of reads | Number of bases | Mean read length | Number of reads aligned | Mean aligned read length | Mean alignment identity | Number of reads aligned | Mean aligned read length | Mean alignment identity |
Lister | 1190 | 917039 | 770.6 | 270 | 651.4 | 70.9 | 751 | 853.313 | 66.147 |
MVA | 589 | 492036 | 835.4 | 18 | 353.8 | 70.1 | 173 | 750.873 | 62.0234 |
Cowpox | 1335 | 1697710 | 1271.7 | 40 | 443.1 | 69.9 | 627 | 758.222 | 61.5688 |
E. coli | 296 | 847593 | 2963.5 | 27 | 622.9 | 70.8 | 47 | 1143.21 | 64.8436 |