Table 3 Average methylation levels of genome, genes, and transposable elements
Methylation level* | FLM | FB | ECM | 5-aza treated | 5-aza untreated | |
|---|---|---|---|---|---|---|
Genome | CG | 30.3% | 28.9% | 6.4% | 26.4% | 25.3% |
CHG | 8.1% | 8.9% | 3.4% | 7.3% | 8.3% | |
CHH | 10.1% | 10.3% | 3.3% | 8.8% | 9.9% | |
Gene | CG | 0.64% | 0.87% | 0.84% | 0.68% | 0.68% |
CHG | 0.36% | 0.61% | 0.82% | 0.39% | 0.41% | |
CHH | 0.39% | 0.63% | 0.95% | 0.43% | 0.44% | |
TE | CG | 70.51% | 69.71% | 59.16% | 72.87% | 72.89% |
CHG | 14.85% | 16.50% | 15.31% | 13.99% | 16.97% | |
CHH | 17.27% | 17.85% | 17.30% | 16.11% | 19.24% | |