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Table 2 Number of cytosines included in the methylation analysis

From: A comprehensive resource of genomic, epigenomic and transcriptomic sequencing data for the black truffle Tuber melanosporum

Number of cytosines* (% genome coverage) FLM FB ECM 5-aza treated 5-aza untreated
CG 7,682,955 (92.58%) 7,444,625 (89.71%) 55,380 (0.67%) 6,594,758 (79.47%) 6,147,635 (74.08%)
CHG 9,111,984 (93.50%) 8,829,674 (90.61%) 52,152 (0.54%) 7,739,358 (79.42%) 7,054,610 (72.39%)
CHH 34,258,661 (91.68%) 32,954,550 (88.19%) 152,076 (0.41%) 28,932,890 (77.43%) 25,963,097 (69.48%)
  1. ECM: ECtoMycorrhiza; FB: FruitBody; FLM: Free-Living Mycelium.
  2. *cytosines with reads coverage > = 4.