Table 1 Summary of sequencing data
Sample | Library | Number of raw reads | Number of uniquely mapped | Mapability | Read length | Coverage per strand (X) |
|---|---|---|---|---|---|---|
FLM | BS-seq | 122,903,319 | 78,983,505 | 64.26% | 100 | 31.61 |
FB | BS-seq | 184,692,678 | 86,778,157 | 46.99% | 100 | 34.73 |
ECM | BS-seq | 182,286,685 | 3,268,721 | 1.79% | 90 | 1.18 |
5-aza treated | BS-seq | 99,836,913 | 41,349,427 | 70.48% | 51 | 8.44 |
5-aza untreated | BS-seq | 84,315,198 | 35,348,536 | 70.19% | 51 | 7.21 |
FLM | WG-seq | 57,386,669 | 45,239,191 | 78.83% | 51 | 9.23 |
FB | WG-seq | 70,844,918 | 50,646,551 | 71.49% | 51 | 10.34 |
FLM | RNA-seq | 68,287,049 | 63,751,666 | 93.36% | 50 | N/A |
FB | RNA-seq | 87,310,639 | 74,090,987 | 84.86% | 50 | N/A |
5-aza treated | RNA-seq | 72,050,137 | 60,644,746 | 84.17% | 51 | N/A |
5-aza untreated | RNA-seq | 75,043,437 | 62,107,389 | 82.76% | 51 | N/A |