Figure 15
From: Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
Optical map results for snake assemblies. Total height of each bar represents total length of scaffolds that were suitable for optical map analysis. Dark blue portions represent ‘level 1 alignments’, sequences that were globally aligned in a restrictive manner. Light blue portions represent ‘level 2 alignments’, sequences that were globally aligned in a permissive manner. Orange portions represent ‘level 3 alignments’, sequences that were locally aligned. Assemblies are ranked in order of the total length of aligned sequence. Note: the SOAP assembly is sub-optimal due to use of mistakenly labeled 4 Kbp and 10 Kbp libraries (see Discussion).