From: SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
Species | Version | Contigs | Scaffolds | ||||||
---|---|---|---|---|---|---|---|---|---|
 |  | Number | N50 (kb) | Errors | N50 corrected(kb) | Number | N50 (kb) | Errors | N50 corrected (kb) |
S. aureus | SOAPdenovo1 | 79 | 148.6 | 156 | 23 | 49 | 342 | 0 | 342 |
 | SOAPdenovo2 | 80 | 98.6 | 25 | 71.5 | 38 | 1,086 | 2 | 1,078 |
 | ALLPATHS-LG* | 37 | 149.7 | 13 | 117.6 | 10 | 1,477 | 1 | 1,093 |
R. sphaeroides | SOAPdenovo1 | 2,242 | 3.5 | 392 | 2.8 | 956 | 105 | 18 | 70 |
 | SOAPdenovo2 | 721 | 18 | 106 | 14.1 | 333 | 2,549 | 4 | 2,540 |
 | ALLPATHS-LG* | 190 | 41.9 | 31 | 36.7 | 32 | 3,191 | 0 | 3,310 |